CDS

Accession Number TCMCG081C10968
gbkey CDS
Protein Id XP_010650837.1
Location complement(join(8500393..8500809,8501788..8502246,8502811..8502955,8503571..8503719,8503813..8503925,8505107..8505142,8505231..8505462))
Gene LOC100241658
GeneID 100241658
Organism Vitis vinifera

Protein

Length 516aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010652535.2
Definition PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K06173        [VIEW IN KEGG]
EC 5.4.99.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTCGTCTCTTCTCTGCGGTTCCCGCTCTTCCCATGGATTATCTCGAACCATACTTCCAATCTTCGTTTCTCAAACCCTAGGATTCTCCCTCAGTGGTCGCTCCATTGTTCATCTTCTTCATCTTCAACTGTCACCGAGTCCAATCCGGACCAGTCGGTCCAGAAATGGGAATCTTTTCGGAAAAAGAAAGTGGTAATGCGGGTCGGATATGTCGGCACCAATTACAGAGGTTTGCAAATGCAGCGAGATGAAAGCTCTTTATCAACTATTGAAGGAGAATTGGAAACTGCTGTGTTTAAGGCCGGGGGAATTCGTGATAGTAATTATGGGAATCTACACAAAATTGGGTGGGACAGAAGTAGCCGAACTGATAAAGGAGTTCACTCATTGGCAACCATGATATCCTTAAAAATGGAAATACCAGCAAATGCATGGAAGGAAGATCCTAATGGCATTGCACTTGCGAATTATGTTAACTTTCATCTTCCTAACAATATCAAAGTTTTCAGCATTTTACCATCACAAAGGAGCTTTGATGCTAGAAGGGAATGTGATCTTCGGAGGTATTCTTACCTCCTCCCAGCTGAAATTATTGGAATTAAAAGTAACTCCAGTGCTTCAGAAATTGATCATCATATAGCAGAGTTCAACGACATATTGAATACTTTTGAGGGAGAACATCCTTTCCAAAACTACACAATACGGTCTAAGTACAGGAAACAGTTTCCTGCAAAGCAATCTCCTGGTAATGGTGGAGTGTTCAGAAGAGCAAAATCATCTGGTGAGGCATCAACTTCTGAGTTTGAGGTAAGTGATGGAGAAGAAAATTCTGGAATCAATGGAGTGATTTCATCAGATTATGATGAGGGAGAGAATCAAAATTCATCAGAGTCCACCAGCTTTGTTGAACATCCAGTTGGAAGTTCCAATAATAATGAGAAGGGTTTGAAGGAGCAAAGTCCCAAATTAGTTGTTCGTGCAAGATGGCTACATGGACCTGATGAGAGAGATAGAATTAGTGCTTCCCACTTCAGAAAGATTTTTAACTGTTCTTGTGGAAAGCTGGAGAAATTTCTTGGATTAGATTACGTTGAGCTTTCCATTTGTGGAGAGTCTTTCATGTTGCATCAAATCCGCAAAATGGTTGGGACTGCAATAGCAGTAAAACGGGAATTACTCCCAAGAGATATTTTGACATTGTCATTGACCAAGTTCTCACGGATTGTCCTGCCCCTTGCCCCTTCTGAAGTTCTAATTTTGAGGGGTAACAGTTTCTCAGTGAGGAAAAAACCTGGCAATGTAAAAAGGCCTGAAATGCTTACATTGATGGAATCTGAGGAAATTCTCAAGTCTGTTGATGAATTCTACACATCTGTAATTTTGCCTCAAGTTTCAAAATTTTTGGACCCTTCAAAGTCTCCTTGGCACGACTGGCTTGAGAACCTAACTCTGTCAAGCATTCCAGAAGCTGAGTTGGATGATGTCAGGACTGCTTGGAAACTGTGGAAGGAAAATTTCCGGAGTAGAACCAAGGTTATGTCCATGTGA
Protein:  
MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPDQSVQKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTLSSIPEAELDDVRTAWKLWKENFRSRTKVMSM